Class 6: Alignment Algorithms

Project 2

Project 2 is now posted, and is due on Wednesday, 21 September, 8:59pm.

Office Hours Update

The location for Ashley’s office hours has moved to Olsson Hall 204. Other than the location, the office hours schedule is unchanged:

Monday, 11am-noon: Jack (Rice 414)
Monday, 1:30-2:45pm: Dave (Rice 507)
Wednesday, noon-1pm: Ashley (Olsson 204)
Wednesday, 2-3pm: Jack (Rice 414)
Friday, 11:30am-12:30pm: Ashley (Olsson 204)

Readings

(Repeated from Class 5)

Before Thursday, 8 September:

Before next Tuesday, 13 September:

  • Read Chapter 19 – 27 of Hubert’s The DNA Book. (Chapter 20 is a bit different, but may be useful to give you ideas for the kinds of things you could do for the Final Project.)

Before next Thursday, 15 September:

Slides

The slides are here: Class 6: Alignment Algorithms.

Some links to materials for the class: